orf finder software (Biotechnology Information)
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orf finder software
Orf Finder Software, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/orf+finder+software/finder+orf/pm42126738-50-19-28
Average 86 stars, based on 1 article reviews
Orf Finder Software, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/orf+finder+software/finder+orf/pm42126738-50-19-28
Average 86 stars, based on 1 article reviews
orf finder software - by Bioz Stars,
2026-11
86/100 stars
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Sequencing:Article Title: Sequence decoding and analysis of the first reference mitogenome of globally threatened clown-knife fish, Chitala chitala: witness of codon usage bias and intense purifying selection. Article Snippet: 1 Department of Biotechnology, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh 2 Fisheries Division, Bangladesh Agricultural Research Council, Dhaka 1215, Bangladesh 3 Department of Fisheries, Ministry of Fisheries and Livestock, Dhaka 1000, Bangladesh 4 Department of Marine Biology, King Abdulaziz University, Jeddah 21589, Saudi Arabia Abstract Background Humped featherback or clown-knife fish, Chitala chitala is an endangered and globally near threatened species.. Mitochondrial genome or mitogenome and its bioinformatic analysis play important roles for the effective conservation of threatened fish species.. Methods and Results Next generation sequencing decoded the complete circular mitochondrial genome of Chitala chitala which is endowed with typical organizational features of 13 protein coding genes (PCGs), 22 tRNA genes, two genes for ribosomal RNA subunits, and two non-coding regions. Article Title: mTOR-related linc-PMB promotes mitochondrial biogenesis via stabilizing SIRT1 mRNA through binding to the HuR protein. Article Snippet: .. Prediction of the protein-coding potential of linc-PMB The protein-coding potential of linc-PMB sequence was evaluated by two well-established algorithms: the Coding Potential Assessment Tool (CPAT) [24,25] and Software:Article Title: Sequence decoding and analysis of the first reference mitogenome of globally threatened clown-knife fish, Chitala chitala: witness of codon usage bias and intense purifying selection. Article Snippet: 1 Department of Biotechnology, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh 2 Fisheries Division, Bangladesh Agricultural Research Council, Dhaka 1215, Bangladesh 3 Department of Fisheries, Ministry of Fisheries and Livestock, Dhaka 1000, Bangladesh 4 Department of Marine Biology, King Abdulaziz University, Jeddah 21589, Saudi Arabia Abstract Background Humped featherback or clown-knife fish, Chitala chitala is an endangered and globally near threatened species.. Mitochondrial genome or mitogenome and its bioinformatic analysis play important roles for the effective conservation of threatened fish species.. Methods and Results Next generation sequencing decoded the complete circular mitochondrial genome of Chitala chitala which is endowed with typical organizational features of 13 protein coding genes (PCGs), 22 tRNA genes, two genes for ribosomal RNA subunits, and two non-coding regions. Article Title: Gain of LINC00624 Enhances Liver Cancer Progression by Disrupting the Histone Deacetylase 6/Tripartite Motif Containing 28/Zinc Finger Protein 354C Corepressor Complex. Article Snippet: A cc ep te d A rt ic le Article Title: The cancer-testis lncRNA lnc-CTHCC promotes hepatocellular carcinogenesis by binding hnRNP K and activating YAP1 transcription. Article Snippet: 1Department of Hepatobiliary Surgery, Affiliated Drum Tower Hospital, Medical School of Nanjing University, Nanjing, China.. 2State Key Laboratory of Reproductive Medicine, Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.. 3Jiangsu Key Lab of Cancer Biomarkers, Prevention and Treatment, Jiangsu Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing, China. Article Title: mTOR-related linc-PMB promotes mitochondrial biogenesis via stabilizing SIRT1 mRNA through binding to the HuR protein. Article Snippet: .. Prediction of the protein-coding potential of linc-PMB The protein-coding potential of linc-PMB sequence was evaluated by two well-established algorithms: the Coding Potential Assessment Tool (CPAT) [24,25] and Article Title: In Vivo Genome-Wide CRISPR Activation Screening Identifies Functionally Important Long Noncoding RNAs in Hepatocellular Carcinoma Article Snippet: .. We confirmed the noncoding nature of CASC11 by using the Article Title: Inflammation-Induced Long Intergenic Noncoding RNA (LINC00665) Increases Malignancy Through Activating the Double-Stranded RNA-Activated Protein Kinase/Nuclear Factor Kappa B Pathway in Hepatocellular Carcinoma. Article Snippet: NF-κB signaling pathway is important for linking inflammation and tumorigenesis.. Here, we characterized a NF-κB-signaling-activation induced long intergenic non-coding RNA in A cc ep te d A rt ic le Article Title: Identification and functional characterization of gonadotropin -releasing hormone in pompano (Trachinotus ovatus). Article Snippet: Gonadotropin-releasing hormone (GnRH) is an important neuropeptide in the reproductive system.. Although GnRH analogues have been used to artificially spawn pompano (Trachinotus sp.), the native forms of GnRH have not been described in this species.. In this study three GnRH subtypes [sea bream GnRH (sbGnRH), chicken GnRH-II (cGnRH-II) and salmon GnRH (sGnRH)] were identified in pompano (Trachinotus ovatus). cgnrh-II and sgnrh were mainly expressed in the brain of male and female fish, showing a tissue-specific expression pattern, while sbgnrh was expressed at different transcriptional levels in all tested tissues. Article Title: Molecular cloning of estrogen receptor and its function on vitellogenesis in pompano (Trachinotus ovatus). Article Snippet: Estrogen receptors (ERs) play a critical role in vitellogenesis (Vtgs).. However, the contribution of each ER for the regulation of vtgs expression was not analyzed clearly in teleosts.. In the present study, three ers isoforms (erα, erβ1, and erβ2) were cloned in pompano (Trachinotus ovatus). |